Short code display in editing mode

I working on a plugin to be compatible with Bricks Theme builder. Basically this plugin create funnels with custom post type. I am using [woocommerce_checkout] shortcode in my checkout page. It works fine when i am using any page or post and adding this shortcode on both front end and backend. But when i am using the funnel template it show shortcode correctly in front end. When i try to re-edit the page it did not show the shortcode content in edit mode until i editing the shortcode or toggling the button “Don’t render in builder”. I am using the single.php file content for my template.
Can you suggest how i can resolve it.